FlushSet-methods {FLUSH.LVS.bundle}R Documentation

Compute Flushing criteria

Description

This function fits a quantile regression on an object of class RA

Usage

## S4 method for signature 'RA':
FlushSet(object, proportion = 0.6, delta = NULL, 
        lambda = delta, df=10,...)

Arguments

object An object of class "RA"
proportion Proportion of genes to filter out, i.e. the quantile to estimate in the quantile regression
delta weighting parameter
lambda weighting parameter
df Degrees of freedom of the B-spline
... Not used

Value

And object of class 'RA' with a new slot

Author(s)

Stefano Calza <calza@med.unibs.it>

References

Stefano Calza, Wolfgang Raffelsberger, Alexander Ploner, Jose Sahel, Thierry Leveillard and Yudi Pawitan. Filtering genes to improve sensitivity in oligonucleotide microarray data analysis - 2007 NAR

Examples


## Not run: 
demo(FLUSH.tour)
FlushSet(choe.RA)
FlushSet(choe.RA, delta = .5)
## End(Not run)

[Package FLUSH.LVS.bundle version 1.3.1 Index]