{"id":414,"date":"2014-11-05T08:59:16","date_gmt":"2014-11-05T08:59:16","guid":{"rendered":"https:\/\/jira-test.meb.ki.se\/wpsites\/biostatwiki\/?p=414"},"modified":"2014-11-05T09:04:34","modified_gmt":"2014-11-05T09:04:34","slug":"tcga-data","status":"publish","type":"post","link":"https:\/\/www.meb.ki.se\/sites\/biostatwiki\/tcga-data\/","title":{"rendered":"TCGA data"},"content":{"rendered":"<h1>TCGA<\/h1>\n<p>This post collects all the information regarding accessing data from <a href=\"https:\/\/tcga-data.nci.nih.gov\/tcga\/\" target=\"_blank\">TCGA<\/a> Database.<\/p>\n<h3>Data Manifest<\/h3>\n<p>Manifest data store summary information on data available in TCGA. The tab separated file can be download as follow<\/p>\n<p><code><br \/>\nwget https:\/\/cghub.ucsc.edu\/reports\/SUMMARY_STATS\/LATEST_MANIFEST.tsv<br \/>\n<\/code><\/p>\n","protected":false},"excerpt":{"rendered":"<p>TCGA This post collects all the information regarding accessing data from TCGA Database. Data Manifest Manifest data store summary information on data available in TCGA. The tab separated file can be download as follow wget https:\/\/cghub.ucsc.edu\/reports\/SUMMARY_STATS\/LATEST_MANIFEST.tsv<\/p>\n","protected":false},"author":8,"featured_media":0,"comment_status":"closed","ping_status":"open","sticky":false,"template":"","format":"standard","meta":{"footnotes":""},"categories":[5,6,4],"tags":[12,8,7],"class_list":["post-414","post","type-post","status-publish","format-standard","hentry","category-database","category-exome-seq","category-rna-seq","tag-database","tag-genomics","tag-ngs"],"jetpack_featured_media_url":"","_links":{"self":[{"href":"https:\/\/www.meb.ki.se\/sites\/biostatwiki\/wp-json\/wp\/v2\/posts\/414","targetHints":{"allow":["GET"]}}],"collection":[{"href":"https:\/\/www.meb.ki.se\/sites\/biostatwiki\/wp-json\/wp\/v2\/posts"}],"about":[{"href":"https:\/\/www.meb.ki.se\/sites\/biostatwiki\/wp-json\/wp\/v2\/types\/post"}],"author":[{"embeddable":true,"href":"https:\/\/www.meb.ki.se\/sites\/biostatwiki\/wp-json\/wp\/v2\/users\/8"}],"replies":[{"embeddable":true,"href":"https:\/\/www.meb.ki.se\/sites\/biostatwiki\/wp-json\/wp\/v2\/comments?post=414"}],"version-history":[{"count":4,"href":"https:\/\/www.meb.ki.se\/sites\/biostatwiki\/wp-json\/wp\/v2\/posts\/414\/revisions"}],"predecessor-version":[{"id":419,"href":"https:\/\/www.meb.ki.se\/sites\/biostatwiki\/wp-json\/wp\/v2\/posts\/414\/revisions\/419"}],"wp:attachment":[{"href":"https:\/\/www.meb.ki.se\/sites\/biostatwiki\/wp-json\/wp\/v2\/media?parent=414"}],"wp:term":[{"taxonomy":"category","embeddable":true,"href":"https:\/\/www.meb.ki.se\/sites\/biostatwiki\/wp-json\/wp\/v2\/categories?post=414"},{"taxonomy":"post_tag","embeddable":true,"href":"https:\/\/www.meb.ki.se\/sites\/biostatwiki\/wp-json\/wp\/v2\/tags?post=414"}],"curies":[{"name":"wp","href":"https:\/\/api.w.org\/{rel}","templated":true}]}}